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RESEARCH
AREAS
My
scientific interests span the range of organs to molecules,
and the development of new technical methods. For the last
twenty years, I have focused on cell mechanics and the mechanisms
by which mechanical forces are transduced into cellular signals.
We discovered mechanosensitive ion channels in 1983, and since
then have studied the channel and cell biophysics. Our methodology
includes patch clamp, high resolution light microscopy, real
time fluorescence microscopy, high speed digital microscopy,
TIRF, digital image analysis, high voltage EM, EM tomography,
AFM, molecular biology, natural product and recombinant protein
biochemistry and structural NMR. We have discovered a specific
inhibitor of mechanosensitive ion channels - a small peptide
found in tarantula venom. Not only does it block the channels,
but it may have clinical applications for brain tumors, muscular
dystrophy and cardiac arrhythmias.
In
addition to the work on mechanosensitive ion channels, we
have studied voltage and ligand gated channels including P2X2
and Shaker channels. We are studying votlage-dependent channel
dynamics using combined AFM and patch clamp. This AFM technique
is also being applied to prestin, the motor protein from outer
hair cells of the cochlea.
My
lab has spent
much time in the development of software for the analysis
of Markovdata data.The random data that is typical of single
channels. This friendly
software allow lay users to do simulation and to apply
Hidden Markov analysis to convert time domain data to state
models. The software has been used not only for ion channel
kinetics but molecular motors and the sleep cycle for rats.
For the last eight years we have taught hands-on courses to
use the software. The course has attracted scientists from
academia, industry and government
In
addition to software, we develop hardware. For example, our
pressure servo is manufactured and sold by ALA scientific.
We do microfabrication projects in silicon technology for
microfluidics and AFM cantilevers. Many of these projects
have been funded by SBIR grants. A number of patents patents
have been issued to laboratory members.
Techniques
in use:
1.
Patch clamp
2.
AFM (+patch clamp)
3.
Low light digital imaging (Ca+2/Na)
4.
Confocal microscopy
5.
High speed digital imaging
6.
Molecular biology
7.
Natural products chemistry
8.
Computer Modeling of the Heart and other tissues
9.
Mathematical modeling of channels
Funding:
NIH, Japan Science and Technology, Keck Foundation, Novascan
Technology, IBM, Hubbard Foundation, Zeneca Pharmaceuticals,
NPS Pharmaceuticals, NSF, NASA, USARO, AHA, MDA, Orion, Burleigh
Instruments, Sutter Instruments
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